Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862699.1_cds_XP_016515427.1_27773
CDS Infomation

[gene=LOC107832135] [db_xref=GeneID:107832135] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016515427.1] [location=complement(join(46743..46891,47099..47170,49276..49351,50335..50425,51338..51411,51498..51660,53076..53300,54530..54777,54905..55034,55950..56176))] [gbkey=CDS]
Sequence

ATGGATCTGAGGAGAAAAGGGTGTTTGATATTGCTTTTGGTTTTGGTTTTGGTGGTGAAT
ATAGTAAAGGGAGATAATAATGTAGTGTTTAATGTGAAGCATAAATATGGTGGGCGTGGA
GGTTCAGTCTTGAATGAACTCAAAGCACATGATAGTCGCCGTCATGGCAGAATGCTTGCC
GCCGTTGACTTCCAATTGGGTGGCAATGGCCAACCCACTGATGCTGCGCTCTATTACACT
AAACTTACAATCGGGACTCCTCCAAAAGACTATCATGTCCAAGTAGATACTGGAAGTGAC
ATCTTATGGGTGAATTGTGCTGGCTGTAGGAGATGTCCTTCAAAAAGCAGTCTTGGGATA
GACTTGACGCTGTATGACTTGAAAGCCTCAGCATCTGGGAAAACCGTTAGTTGCGACCAA
GACTTTTGCACTGATATGTTTAATGCTCCCTACTCAGATTGCAGAGTGGGGGCACCTTGT
GAATATCAGGTTACTTACGGAGACGGCAGCTCAACTTCTGGATACTTTGTAAAGGATTTC
ATTCATTTTGATCAAGTGTCTGGAAATCTTAAAACCACAGCAATGAATGGGTCAATAGCA
TTTGGGTGCTCATCTAGTCAATCAGGAGAGCTAGGTTCATCTACTCAAGCAGTTGATGGA
ATAATTGGTTTTGGACAAGCAAACTCATCCCTTATTTCGCAGCTAGCTGTATCCGGAAAG
GTGAAAAAAGTATTTGCACATTGCCTGGACGGCAGTAATGGTGGTGGCATATTTGCCATT
GGACAAGTAGTTCAGCCGAAAGTAAAGTCAACACCACTAGTCCCAAATGAGCCACATTAC
AATGTTGTCATGAAGGGAATTGAGGTTAATGGTAAAGCTCTTGACATCCCTACGACTATC
TTTGACGCGGGATCCAATAGAGGAACAATAATTGACAGTGGTACAACCTTAGCATATCTT
CCTAACAAGGTCTATAGTGCTCTTATGTCCAAGTTGATGGTTAAGCAACCAGATTTGCCG
ACTCATCTTGTTGAGGGGAGCTTCCACTGCTTTTACTACAGTGGAAAGGTTGATGATGGT
TTCCCAGTTGTAACCTTTCAGTTTGCTGATTCTCTGTCTTTGACAGTTTATCCGCACGAT
TATCTTTTCCAAGTTAATGACAACGAATGGTGTATTGGTTGGCAGGACAGTGGAATGCAG
ACAAAGGATGGAAAGGAAATCACTCTGTTAGGAGATCTTGTGCTATCCAACAAGCTTGTT
CTGTATGATCTTGAAAACCAGAGTATTGGCTGGACTGAATATAACTGCTCTTCGAGCATC
AAAGTCAGAGATGAAACTTCTGGAAAAGATTATACCATAGGTGCTCACAATATTTCATCA
GCTTCGACTGTCAATTCAAGAATGCTTTCTATGTTCATATTGATGATCTCCATCCTATGC
AATTTGTTGAAGTGA

Peptide Sequence

PEP ID

XP_016515427.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MDLRRKGCLILLLVLVLVVNIVKGDNNVVFNVKHKYGGRGGSVLNELKAHDSRRHGRMLA
AVDFQLGGNGQPTDAALYYTKLTIGTPPKDYHVQVDTGSDILWVNCAGCRRCPSKSSLGI
DLTLYDLKASASGKTVSCDQDFCTDMFNAPYSDCRVGAPCEYQVTYGDGSSTSGYFVKDF
IHFDQVSGNLKTTAMNGSIAFGCSSSQSGELGSSTQAVDGIIGFGQANSSLISQLAVSGK
VKKVFAHCLDGSNGGGIFAIGQVVQPKVKSTPLVPNEPHYNVVMKGIEVNGKALDIPTTI
FDAGSNRGTIIDSGTTLAYLPNKVYSALMSKLMVKQPDLPTHLVEGSFHCFYYSGKVDDG
FPVVTFQFADSLSLTVYPHDYLFQVNDNEWCIGWQDSGMQTKDGKEITLLGDLVLSNKLV
LYDLENQSIGWTEYNCSSSIKVRDETSGKDYTIGAHNISSASTVNSRMLSMFILMISILC
NLLK

Transcript Sequence

Gene sequence data has not been registered.